Fixes #32685 - update graphql to 1.13.x

GrapQL 1.13.x is a large update and can break plugins, but it is Ruby 3
compatible.

Co-authored-by: Oleh Fedorenko <ofedoren@redhat.com>

Fixes #34328 - GraphQL use directly SettingRegistry

GraphQL was reading the settings from DB, but now we have the registry, it needs to read it from there instead.

Mutation needs to set the value through the SettingRegistry as well.

Fixes #33647 - Return persisted attrs on edit mutation

Fixes #31766 - drop Puppetclass GraphQL

Extracted in https://github.com/theforeman/foreman_puppet_enc/pull/110

Fixes #30387 - Remove `view_bookmarks` permission

Users should always be able to see public bookmarks and their own
bookmarks, a permission is not needed for this case.

Refs #28920 - Add more tests

Fixes #28920 - Add queries and mutation for settings

Fixes #29325 - Add queries, mutations for bookmarks

Fixes #28974 - Add mutations for operating systems

Fixes #19792 - Fix Layout/SpaceInsideBlockBraces cop